Overview

rs6679677 is a genetic variant on gene PHTF1.

This variant is located on chromosome 1. The variations at position 113761186 are the genetic letters A/A, C/C, T/T, A/C, A/T, C/T

Since humans have each twice (one from each parent), these letter-variations occur on both chromosomes. People can have the same or different letters on both chromosomes. Every person's individual variation combination is referred to as genotype. For variant rs6679677 there are 6 currently known genotypes : A/A, C/C, T/T, A/C, A/T or C/T

Short Overview

Variant Location

rs6679677 is located on gene PHTF1 in chromsome 1. Use the genome browser to explore the location of rs6679677 and its genetic neighbourhood.

Conditions & Traits

rs6679677 affects the following conditions and traits:

There are currently 0 conditions and 0 traits associated with rs6679677.

Pathogenicity

rs6679677 affects the following conditions:

There are currently 0 conditions associated with rs6679677.

Pharmacogenetics

We do not have any data that links rs6679677 to any drugs.

Diagnostics

rs6679677 is commonly tested together with other variants on the same gene.

Genome Browser

This interactive browser visualizes what no human can see with the naked eye - our DNA. From a down to a specific position on a . The position you are looking at here is the exact location of variant rs on gene PHTF1. Explore more variants and their effects on the body by browsing left and right along the DNA strand.

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Did you know genetic variants affect drugs?

Mutations are changes in genes and genetic variations are differences in the DNA among people. Variants are tiny changes in just one piece of the DNA while haplotypes are groups of these changes that usually come together.

Dr. Wallerstorfer

Conditions & Traits of rs6679677

Current research shows 0 conditions and 0 traits.

Diagnostics

rs6679677 is commonly tested together with other variants on the same gene.

Genotype Distribution

Knowing your genome can actually tell you a lot about your ancestors.

The prevalence of the different genotypes is based on the native inhabitants of a region. In the map below you see how common each genotype is in the native inhabitants of those regions. Since genetic material is passed down form generation to generation, your DNA shows traces of the geographical origins of your ancestors.

This data is based on “The 1000 Genomes Project” which established one of the most detailed overviews of human genetic variations across the globe. The regions are broadly categorized into five continental groups: Africa, America, Europe, South Asia and East Asia. All continental groups together display the global prevalence. Click through the regions, to learn more about the local prevalence of the possible genotypes.

At present, there is no distribution data available for SNP 6679677. 6679677.

The Genotype Distribution in the selected area is:
Legend:
Included regions
Excluded regions
no-data

Studies and Sources

All of the resources below examine variant rs6679677

DeepCOMBI: explainable artificial intelligence for the analysis and discovery in genome-wide association studies (September 2021)

Bettina Mieth, Alexandre Rozier, Juan Antonio Rodriguez, Marina M C Höhne, Nico Görnitz, Klaus-Robert Müller

PMC: 8291080
Functional genomics atlas of synovial fibroblasts defining rheumatoid arthritis heritability (8/25/21)

Xiangyu Ge, Mojca Frank-Bertoncelj, Kerstin Klein, Amanda McGovern, Tadeja Kuret, Miranda Houtman, Blaž Burja, Raphael Micheroli, Chenfu Shi, Miriam Marks, Andrew Filer, Christopher D. Buckley, Gisela Orozco, Oliver Distler, Andrew P. Morris, Paul Martin, Stephen Eyre, Caroline Ospelt

PMC: 8385949
Identifying the lungs as a susceptible site for allele-specific regulatory changes associated with type 1 diabetes risk (9/14/21)

Daniel Ho, Denis M. Nyaga, William Schierding, Richard Saffery, Jo K. Perry, John A. Taylor, Mark H. Vickers, Andreas W. Kempa-Liehr, Justin M. O’Sullivan

PMC: 8440780
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