Overview

rs13107325 is a genetic variant on gene SLC39A8 associated with Intelligence and Alcohol use disorder.

This variant is located on chromosome 4. The variations at position 102267552 are the genetic letters A/A, C/C, T/T, A/C, C/T

Since humans have each twice (one from each parent), these letter-variations occur on both chromosomes. People can have the same or different letters on both chromosomes. Every person's individual variation combination is referred to as genotype. For variant rs13107325 there are 5 currently known genotypes : A/A, C/C, T/T, A/C or C/T

Short Overview

Variant Location

rs13107325 is located on gene SLC39A8 in chromsome 4. Use the genome browser to explore the location of rs13107325 and its genetic neighbourhood.

Pharmacogenetics

We do not have any data that links rs13107325 to any drugs.

Diagnostics

rs13107325 is commonly tested together with other variants on the same gene.

Genome Browser

This interactive browser visualizes what no human can see with the naked eye - our DNA. From a down to a specific position on a . The position you are looking at here is the exact location of variant rs on gene SLC39A8. Explore more variants and their effects on the body by browsing left and right along the DNA strand.

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Did you know genetic variants affect drugs?

Mutations are random changes in the DNA and genetic variations are differences in the DNA among people. Variants are tiny changes in just one piece of the DNA while haplotypes are groups of these changes that usually come together.

doctor_quote

Dr. Wallerstorfer

Conditions & Traits of rs13107325

The different genotypes of variant rs13107325 can affect the expression or likelyhood of developing certain traits or conditions. Current research shows that 6 conditions and 1 trait are associated with rs13107325. The following table shows the relationship between genotypes and conditions and traits.

Did you know genetic variants affect drugs?

Genetic variants can influence how our body reacts to certain drugs. The presence of specific genetic variants can increase or decrease the efficiency and effectiveness of a drug, impacting how well it works inside our system. Additionally, certain genetic variants can heighten or lessen the toxicity of a drug, thereby affecting the risk of unwanted side effects. They can also alter how a drug is metabolized, which influences the appropriate dosage one should receive.

doctor_quote

Dr. Wallerstorfer

Variant Classification based on Clinical Testing

Clinical testing classifications are designed to help doctors understand how genetic changes, known as variants, might affect a person’s health and guide medical decisions. Variants are labeled as Disease Causing (harmful), likely Disease Causing, Unknown Effect (unknown impact), Likely No Effect (likely not harmful), and No Effect (not harmful). This classification relies on a mix of family history, lab tests, and computer predictions to determine the impact of variants.

Variants can have different effects based on their location. Variants on the X chromosome often impact males more because they have only one X chromosome, while females have two. This influences the classification (effect) of the variant.

Variant Table Legend

Clinical Testing

Scientific Studies

Biological Male Symbol

Biological Female Symbol

Unisex Symbol for both Genders

Genotype

C

C

Level of evidence

No Effect

Unisex

1 Sources

Participants: 0

The genotype with the letters C/C is thought to have no effect on your disease risk. Carriers of this genetic result are usually not at risk of developing the disease.

Genotype

T

T

Level of evidence

Unknown effect

Unisex

1 Sources

Participants: 0

The genotype with the letters T/T has an unknown effect on your disease risk. This means that the scientific evidence is still somewhat unclear about its effect.

Genotype

C

T

Level of evidence

Unknown effect

Unisex

1 Sources

Participants: 0

The genotype with the letters C/T has an unknown effect on your disease risk. This means that the scientific evidence is still somewhat unclear about its effect.

Genotype

C

C

Level of evidence

No Effect

Unisex

1 Sources

Participants: 0

The genotype with the letters C/C is thought to have no effect on your disease risk. Carriers of this genetic result are usually not at risk of developing the disease.

Genotype

T

T

Level of evidence

Unknown effect

Unisex

1 Sources

Participants: 0

The genotype with the letters T/T has an unknown effect on your disease risk. This means that the scientific evidence is still somewhat unclear about its effect.

Genotype

C

T

Level of evidence

Unknown effect

Unisex

1 Sources

Participants: 0

The genotype with the letters C/T has an unknown effect on your disease risk. This means that the scientific evidence is still somewhat unclear about its effect.

Variant Classification based on Scientific Studies

Scientific studies classifications aim to uncover how genetic variants function and their roles in diseases, traits, and evolution. Variants are categorized based on their functional impact, such as loss-of-function (reduces gene activity), gain-of-function (increases gene activity), neutral (no significant impact), or evolutionary conservation. This classification uses experimental data, population studies, and computational analyses to understand variant effects. Unlike clinical testing, which focuses on immediate health impacts, scientific studies explore broader genetic mechanisms and long-term implications.

Genotype

C

C

Level of evidence

No Effect

Unisex

1 Sources

Participants: 272842

No available data

Genotype

T

T

Level of evidence

No Effect

Unisex

2 Sources

Participants: 723589

No available data

Genotype

A

C

Level of evidence

No Effect

Unisex

1 Sources

Participants: 272842

No available data

Genotype

C

T

Level of evidence

No Effect

Unisex

3 Sources

Participants: 996431

No available data

Genotype

C

C

Level of evidence

No Effect

Unisex

1 Sources

Participants: 272842

No available data

Genotype

T

T

Level of evidence

No Effect

Unisex

2 Sources

Participants: 723589

No available data

Genotype

A

C

Level of evidence

No Effect

Unisex

1 Sources

Participants: 272842

No available data

Genotype

C

T

Level of evidence

No Effect

Unisex

3 Sources

Participants: 996431

No available data

Pharmacogenetics

The genetic variant rs13107325 impacts how certain medications work in the body. This difference may cause some of us to require different dosage amounts to achieve the desired effects, while others might experience more apparent side-effects. As a result, healthcare providers may need to adjust prescriptions for those individuals with rs13107325. Ultimately, understanding our genetic makeup helps improve the overall effectiveness and usability of medications. Tailoring treatments based on genetics ensures a safer, more personalized healthcare experience.

Drugs related to rs13107325

All drugs that are linked to rs13107325 are listed here.

Diagnostics

rs13107325 is commonly tested together with other variants on the same gene.

Related variants

Conditions and traits are often affected by more than one variant. It is important to understand these other factors to get a better understanding of how genetics affect certain conditions and traits. The following grid shows other variants that affect the same conditions and traits as rs13107325.

Genotype Distribution

Knowing your genome can actually tell you a lot about your ancestors.

The prevalence of the different genotypes is based on the native inhabitants of a region. In the map below you see how common each genotype is in the native inhabitants of those regions. Since genetic material is passed down form generation to generation, your DNA shows traces of the geographical origins of your ancestors.

This data is based on “The 1000 Genomes Project” which established one of the most detailed overviews of human genetic variations across the globe. The regions are broadly categorized into five continental groups: Africa, America, Europe, South Asia and East Asia. All continental groups together display the global prevalence. Click through the regions, to learn more about the local prevalence of the possible genotypes.

At present, there is no distribution data available for SNP 13107325. 13107325.

The Genotype Distribution in the selected area is:
Legend:
Included regions
Excluded regions
no-data

Studies and Sources

All of the resources below examine variant rs

Association of milk intake with hay fever, asthma, and lung function: a Mendelian Randomization analysis (7/1/22)

Tea Skaaby, Tuomas O. Kilpeläinen, Yuvaraj Mahendran, Lam Opal Huang, Hannah Sallis, Betina H. Thuesen, Line Lund Kårhus, Katja Biering Leth-Møller, Niels Grarup, Torben Hansen, Oluf Pedersen, Stephen Burgess, Marcus R. Munafò, Allan Linneberg

PMC: 7614013
PMC: 9203552
The Allelic Variant A391T of Metal Ion Transporter ZIP8 (SLC39A8) Leads to Hypotension and Enhanced Insulin Resistance (6/15/22)

Sophia N. Verouti, Jonai Pujol-Giménez, Paola Bermudez-Lekerika, Laeticia Scherler, Rajesh Bhardwaj, Aurélien Thomas, Sébastien Lenglet, Mark Siegrist, Willy Hofstetter, Daniel G. Fuster, Matthias A. Hediger, Geneviève Escher, Bruno Vogt

PMC: 9240775
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