Overview

rs2305089 is a genetic variant on gene TBXT associated with Microcephaly-thin corpus callosum-intellectual disability syndrome.

This variant is located on chromosome 6. The variations at position 166165782 are the genetic letters A/A, C/C, T/T, A/C, A/T, C/T

Since humans have each twice (one from each parent), these letter-variations occur on both chromosomes. People can have the same or different letters on both chromosomes. Every person's individual variation combination is referred to as genotype. For variant rs2305089 there are 6 currently known genotypes : A/A, C/C, T/T, A/C, A/T or C/T

Short Overview

Variant Location

rs2305089 is located on gene TBXT in chromsome 6. Use the genome browser to explore the location of rs2305089 and its genetic neighbourhood.

Conditions & Traits

rs2305089 affects the following conditions and traits:

Pathogenicity

rs2305089 affects the following conditions:

Pharmacogenetics

rs2305089 affects the following drugs:

Genome Browser

This interactive browser visualizes what no human can see with the naked eye - our DNA. From a down to a specific position on a . The position you are looking at here is the exact location of variant rs on gene TBXT. Explore more variants and their effects on the body by browsing left and right along the DNA strand.

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Did you know genetic variants affect drugs?

Mutations are changes in genes and genetic variations are differences in the DNA among people. Variants are tiny changes in just one piece of the DNA while haplotypes are groups of these changes that usually come together.

Dr. Wallerstorfer Dr. Wallerstorfer

Conditions & Traits of rs2305089

The different genotypes of variant rs2305089 can affect the likelyhood of developing certain traits or conditions. Current research shows that 1 condition and 0 traits are associated with rs2305089. The following table shows the relationship between genotypes and conditions and traits.

Classification of Variants

Variants can be classified either based on scientific studies or clinical tests. Scientific studies classifications aim to uncover the function of genetic variants and their role in conditions, traits, and evolution. Variants are categorized according to their functional effect, such as loss-of-function (reduced gene activity), gain-of-function (increased gene activity), neutral (no significant impact) or evolutionary conservation. This classification uses experimental data, population studies, and computational analyses to understand the long-term effects of variants. Clinical testing classifications, however, focus on the immediate health impact on the human body, distinguishing five categories from disease causing (harmful) to no effect (not harmful). This classification relies on a mix of family history, lab tests, and computer predictions, aiming to assist doctors in making medical decisions.

Condition

1

Genotype

C

C

Level of evidence

Sources

No effect

Unisex

1 Sources

Participants: 0

The genotype with the letters C/C is thought to have no effect on your disease risk. Carriers of this genetic result are usually not at risk of developing the disease.

Genotype

T

T

Level of evidence

Sources

No effect

Unisex

1 Sources

Participants: 0

The genotype with the letters T/T is thought to have no effect on your disease risk. Carriers of this genetic result are usually not at risk of developing the disease.

Genotype

C

T

Level of evidence

Sources

No effect

Unisex

1 Sources

Participants: 0

The genotype with the letters C/T is thought to have no effect on your disease risk. Carriers of this genetic result are usually not at risk of developing the disease.

Pharmacogenetics

The genetic variant rs2305089 impacts how certain medications work in the body. This difference may cause some of us to require different dosage amounts to achieve the desired effects, while others might experience more apparent side-effects. As a result, healthcare providers may need to adjust prescriptions for those individuals with rs2305089. Ultimately, understanding our genetic makeup helps improve the overall effectiveness and usability of medications. Tailoring treatments based on genetics ensures a safer, more personalized healthcare experience.

Genotype
Level of evidence
Impacts
Summary
CC

Breakdown

Drug Effect

Side Effects

Dosage

Individuals with the genotype C/C have decreased Drug Effect to FLUNISOLIDE.

more info

CT

Breakdown

Drug Effect

Side Effects

Dosage

Individuals with the genotype C/T have decreased Drug Effect to FLUNISOLIDE.

more info

TT

Breakdown

Drug Effect

Side Effects

Dosage

Individuals with the genotype T/T have increased Drug Effect to FLUNISOLIDE.

more info

Legend:

Increased

Decreased

No known effect

Genotype
CC
Impacts

Breakdown

Drug Effect

Side Effects

Dosage

Summary

Individuals with the genotype C/C have decreased Drug Effect to FLUNISOLIDE.

Level of evidence

More info

Genotype
CT
Impacts

Breakdown

Drug Effect

Side Effects

Dosage

Summary

Individuals with the genotype C/T have decreased Drug Effect to FLUNISOLIDE.

Level of evidence

More info

Genotype
TT
Impacts

Breakdown

Drug Effect

Side Effects

Dosage

Summary

Individuals with the genotype T/T have increased Drug Effect to FLUNISOLIDE.

Level of evidence

More info

Legend:

Increased

Decreased

No known effect

Drugs related to rs2305089

All drugs that are linked to rs2305089 are listed here.

Studies and Sources

All of the resources below examine variant rs2305089

Pharmacogenetic Factors Affecting Asthma Treatment Response. Potential Implications for Drug Therapy (5/21/19)

Jesús Miguel García-Menaya, Concepción Cordobés-Durán, Elena García-Martín, José A. G. Agúndez

PMC: 6537658
Predictive Analytics in Spine Oncology Research: First Steps, Limitations, and Future Directions (December 2019)

Elie Massaad, Nida Fatima, Muhamed Hadzipasic, Christopher Alvarez-Breckenridge, Ganesh M. Shankar, John H. Shin

PMC: 6944986
Identification of the Different Roles and Potential Mechanisms of T Isoforms in the Tumor Recurrence and Cell Cycle of Chordomas (12/31/19)

Junpeng Ma, Wei Chen, Ke Wang, Kaibing Tian, Qi Li, Tianna Zhao, Liwei Zhang, Liang Wang, Zhen Wu, Junting Zhang

PMC: 6997418
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