Overview

SNPs are specific locations in the DNA where genetic variations can occur. Every person has a unique composition of variations.

SNP rs4819554 is located on chromosome 22. The most common variation at this position is the G. People with other variations might either have letter A or C instead.

Since humans have each twice (one from each parent), these letter-variations occur on both chromosomes. People can have the same or different letters on both chromosomes. Every person's individual variation assembly is referred to as genotype. For SNP rs4819554 there are 3 currently known genotypes: C/T , T/T or C/C

Genome Browser

This interactive browser visualizes what no human can see with the naked eye - our DNA. From a down to a specific position on a . The position you are looking at here is the exact location of SNP rs4819554. Explore more SNPs and their effects on the body by browsing left and right along the DNA strand.

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Mitochondrial DNAMitochondrial DNA
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Effects relating to rs4819554

Your genetic code influences you in many ways. This may be by either causing you to have a specific trait (eg. Eye colour) or your risk of developing a specific disease.

Each combination of genetic letters (called bases) is called a genotype for this specific SNP. Each Genotype can have a different effect on your body. The table below shows which genotype causes which traits or disease risks.

Current research shows 2 disease risks associated with rs4819554. The following table shows the relationship between genotype and .



Genotype CT

Effect Likelihood Level of evidenceResearch
Cardiovascular mortality
1.28x
Common variants in IL-17A/IL-17RA axis contribute to predisposition to and progression of congestive heart failure (2016)

Sandip, Chaugai, Tan, Lun, Huang, Jin, Li, Qing, Ni, Li, Cianflone, Katherine, Wang, Dao Wen

Text Extract:

Furthermore, prospective follow-up of 12.7 months for the occurrence of adverse clinical outcomes showed that rs4819554 in IL17RA was significantly associated with cardiovascular mortality (hazard ratio [HR] = 1.28; 95% CI = 1.021.59, adjusted P = 0.03) after adjustments for multiple cardiovascular risk factors and New York Heart Association functional class

PMCID: PMCID5058840
Read on PMC
Cancer
0.25x
Association between interleukin 17/interleukin 17 receptor gene polymorphisms and papillary thyroid cancer in Korean population. (2015)

Lee, Young Chan, Chung, Joo-Ho, Kim, Su Kang, Rhee, Sang Youl, Chon, Suk, Oh, Seung Joon, Hong, Il Ki, Eun, Young Gyu

Text Extract:

Furthermore, the IL17RA SNP rs4819554 (dominant model, OR=0.25, P=0.010) was significantly associated with lack of cancer bilaterality.In this study of SNPs in the IL17 and IL17R genes in patients with PTC, we demonstrated that IL17RA polymorphisms can influence both the development and the bilaterality of PTC.Copyright © 2014 Elsevier Ltd. All rights reserved

PMID: PMID25484349
Read on PubMed
Legend:
Increased probability
Decreased probability
No known effect

Genotype TT

Effect Likelihood Level of evidenceResearch
Cardiovascular mortality
1.00x
Common variants in IL-17A/IL-17RA axis contribute to predisposition to and progression of congestive heart failure (2016)

Sandip, Chaugai, Tan, Lun, Huang, Jin, Li, Qing, Ni, Li, Cianflone, Katherine, Wang, Dao Wen

Text Extract:

Furthermore, prospective follow-up of 12.7 months for the occurrence of adverse clinical outcomes showed that rs4819554 in IL17RA was significantly associated with cardiovascular mortality (hazard ratio [HR] = 1.28; 95% CI = 1.021.59, adjusted P = 0.03) after adjustments for multiple cardiovascular risk factors and New York Heart Association functional class

PMCID: PMCID5058840
Read on PMC
Cancer
1.00x
Association between interleukin 17/interleukin 17 receptor gene polymorphisms and papillary thyroid cancer in Korean population. (2015)

Lee, Young Chan, Chung, Joo-Ho, Kim, Su Kang, Rhee, Sang Youl, Chon, Suk, Oh, Seung Joon, Hong, Il Ki, Eun, Young Gyu

Text Extract:

Furthermore, the IL17RA SNP rs4819554 (dominant model, OR=0.25, P=0.010) was significantly associated with lack of cancer bilaterality.In this study of SNPs in the IL17 and IL17R genes in patients with PTC, we demonstrated that IL17RA polymorphisms can influence both the development and the bilaterality of PTC.Copyright © 2014 Elsevier Ltd. All rights reserved

PMID: PMID25484349
Read on PubMed
Legend:
Increased probability
Decreased probability
No known effect

Genotype CC

Effect Likelihood Level of evidenceResearch
Cardiovascular mortality
1.56x
Common variants in IL-17A/IL-17RA axis contribute to predisposition to and progression of congestive heart failure (2016)

Sandip, Chaugai, Tan, Lun, Huang, Jin, Li, Qing, Ni, Li, Cianflone, Katherine, Wang, Dao Wen

Text Extract:

Furthermore, prospective follow-up of 12.7 months for the occurrence of adverse clinical outcomes showed that rs4819554 in IL17RA was significantly associated with cardiovascular mortality (hazard ratio [HR] = 1.28; 95% CI = 1.021.59, adjusted P = 0.03) after adjustments for multiple cardiovascular risk factors and New York Heart Association functional class

PMCID: PMCID5058840
Read on PMC
Cancer
0.06x
Association between interleukin 17/interleukin 17 receptor gene polymorphisms and papillary thyroid cancer in Korean population. (2015)

Lee, Young Chan, Chung, Joo-Ho, Kim, Su Kang, Rhee, Sang Youl, Chon, Suk, Oh, Seung Joon, Hong, Il Ki, Eun, Young Gyu

Text Extract:

Furthermore, the IL17RA SNP rs4819554 (dominant model, OR=0.25, P=0.010) was significantly associated with lack of cancer bilaterality.In this study of SNPs in the IL17 and IL17R genes in patients with PTC, we demonstrated that IL17RA polymorphisms can influence both the development and the bilaterality of PTC.Copyright © 2014 Elsevier Ltd. All rights reserved

PMID: PMID25484349
Read on PubMed
Legend:
Increased probability
Decreased probability
No known effect

Distribution

Knowing your genome can actually tell you a lot about your ancestors.

The prevalence of the different genotypes is based on the native inhabitants of a region. In the map below you see how common each genotype is in the native inhabitants of those regions. Since genetic material is passed down form generation to generation, your DNA shows traces of the geographical origins of your ancestors.

This data is based on “The 1000 Genomes Project” which established one of the most detailed overviews of human genetic variations across the globe. The regions are broadly categorized into five continental groups: Africa, America, Europe, South Asia and East Asia. All continental groups together display the global prevalence. Click through the regions, to learn more about the local prevalence of the possible genotypes.

At present, there is no distribution data available for SNP rs4819554.

Studies and sources

All of the resources below examine SNP rs4819554

Genotype CT

Common variants in IL-17A/IL-17RA axis contribute to predisposition to and progression of congestive heart failure (2016)

Sandip, Chaugai, Tan, Lun, Huang, Jin, Li, Qing, Ni, Li, Cianflone, Katherine, Wang, Dao Wen

PMCID: PMCID5058840
Association between interleukin 17/interleukin 17 receptor gene polymorphisms and papillary thyroid cancer in Korean population. (2015)

Lee, Young Chan, Chung, Joo-Ho, Kim, Su Kang, Rhee, Sang Youl, Chon, Suk, Oh, Seung Joon, Hong, Il Ki, Eun, Young Gyu

PMID: PMID25484349

Genotype TT

Common variants in IL-17A/IL-17RA axis contribute to predisposition to and progression of congestive heart failure (2016)

Sandip, Chaugai, Tan, Lun, Huang, Jin, Li, Qing, Ni, Li, Cianflone, Katherine, Wang, Dao Wen

PMCID: PMCID5058840
Association between interleukin 17/interleukin 17 receptor gene polymorphisms and papillary thyroid cancer in Korean population. (2015)

Lee, Young Chan, Chung, Joo-Ho, Kim, Su Kang, Rhee, Sang Youl, Chon, Suk, Oh, Seung Joon, Hong, Il Ki, Eun, Young Gyu

PMID: PMID25484349

Genotype CC

Common variants in IL-17A/IL-17RA axis contribute to predisposition to and progression of congestive heart failure (2016)

Sandip, Chaugai, Tan, Lun, Huang, Jin, Li, Qing, Ni, Li, Cianflone, Katherine, Wang, Dao Wen

PMCID: PMCID5058840
Association between interleukin 17/interleukin 17 receptor gene polymorphisms and papillary thyroid cancer in Korean population. (2015)

Lee, Young Chan, Chung, Joo-Ho, Kim, Su Kang, Rhee, Sang Youl, Chon, Suk, Oh, Seung Joon, Hong, Il Ki, Eun, Young Gyu

PMID: PMID25484349