Overview

SNPs are specific locations in the DNA where genetic variations can occur. Every person has a unique composition of variations.

SNP rs174576 is located on chromosome 11. The most common variation at this position is the C. People with other variations might have letter A instead.

Since humans have each twice (one from each parent), these letter-variations occur on both chromosomes. People can have the same or different letters on both chromosomes. Every person's individual variation assembly is referred to as genotype. For SNP rs174576 there are 3 currently known genotypes: A/G , G/G or A/A

Genome Browser

This interactive browser visualizes what no human can see with the naked eye - our DNA. From a down to a specific position on a . The position you are looking at here is the exact location of SNP rs174576. Explore more SNPs and their effects on the body by browsing left and right along the DNA strand.

11
22
33
44
55
66
77
88
99
1010
1111
1212
1313
1414
1515
1616
1717
1818
1919
2020
2121
2222
XX
XX
Mitochondrial DNAMitochondrial DNA
Loading Genome Browser...

Effects relating to rs174576

Your genetic code influences you in many ways. This may be by either causing you to have a specific trait (eg. Eye colour) or your risk of developing a specific disease.

Each combination of genetic letters (called bases) is called a genotype for this specific SNP. Each Genotype can have a different effect on your body. The table below shows which genotype causes which traits or disease risks.

Current research shows 2 disease risks associated with rs174576. The following table shows the relationship between genotype and .



Genotype AG

Effect Likelihood Level of evidenceResearch
Borderline personality disorder
1.10x
Replicated associations of FADS1, MAD1L1, and a rare variant at 10q26.13 with bipolar disorder in Chinese population (2018)

Zhao, Lijuan, Chang, Hong, Zhou, Dong-Sheng, Cai, Jun, Fan, Weixing, Tang, Wei, Tang, Wenxin, Li, Xingxing, Liu, Weiqing, Liu, Fang, He, Yuanfang, Bai, Yan, Sun, Yan, Dai, Jiapei, Li, Lingyi, Xiao, Xiao, Zhang, Chen, Li, Ming

Text Extract:

When our Han Chinese samples were combined with data from previous GWAS samples of Japanese17 (2964 cases and 61,887 controls) and Europeans22 (20,129 cases and 21,524 controls) for further meta-analysis, a stronger genome-wide association between rs174576 and BPD was seen under fixed effect model (two-tailed p=9.33E13, OR=1.098, Table 2)

PMCID: PMCID6286364
Read on PMC
Dyslipidemia/type 2 diabetes
1.12x
A genome-wide association study identifies two novel susceptibility loci and trans population polygenicity associated with bipolar disorder

Ikeda, M, Takahashi, A, Kamatani, Y, Okahisa, Y, Kunugi, H, Mori, N, Sasaki, T, Ohmori, T, Okamoto, Y, Kawasaki, H, Shimodera, S, Kato, T, Yoneda, H, Yoshimura, R, Iyo, M, Matsuda, K, Akiyama, M, Ashikawa, K, Kashiwase, K, Tokunaga, K, Kondo, K, Saito, T, Shimasaki, A, Kawase, K, Kitajima, T, Matsuo, K, Itokawa, M, Someya, T, Inada, T, Hashimoto, R, Inoue, T, Akiyama, K, Tanii, H, Arai, H, Kanba, S, Ozaki, N, Kusumi, I, Yoshikawa, T, Kubo, M, Iwata, N

Text Extract:

When we set control samples excluding dyslipidemia/T2D subjects, rs174576 still reached genome-wide significance (P=4.9 109; OR=1.12, 95% confidence interval: 1.081.16), indicating that any possible bias derived from samples with dyslipidemia/T2D did not influence the significance

PMCID: PMCID5822448
Read on PMC
Legend:
Increased probability
Decreased probability
No known effect

Genotype GG

Effect Likelihood Level of evidenceResearch
Borderline personality disorder
1.00x
Replicated associations of FADS1, MAD1L1, and a rare variant at 10q26.13 with bipolar disorder in Chinese population (2018)

Zhao, Lijuan, Chang, Hong, Zhou, Dong-Sheng, Cai, Jun, Fan, Weixing, Tang, Wei, Tang, Wenxin, Li, Xingxing, Liu, Weiqing, Liu, Fang, He, Yuanfang, Bai, Yan, Sun, Yan, Dai, Jiapei, Li, Lingyi, Xiao, Xiao, Zhang, Chen, Li, Ming

Text Extract:

When our Han Chinese samples were combined with data from previous GWAS samples of Japanese17 (2964 cases and 61,887 controls) and Europeans22 (20,129 cases and 21,524 controls) for further meta-analysis, a stronger genome-wide association between rs174576 and BPD was seen under fixed effect model (two-tailed p=9.33E13, OR=1.098, Table 2)

PMCID: PMCID6286364
Read on PMC
Dyslipidemia/type 2 diabetes
1.00x
A genome-wide association study identifies two novel susceptibility loci and trans population polygenicity associated with bipolar disorder

Ikeda, M, Takahashi, A, Kamatani, Y, Okahisa, Y, Kunugi, H, Mori, N, Sasaki, T, Ohmori, T, Okamoto, Y, Kawasaki, H, Shimodera, S, Kato, T, Yoneda, H, Yoshimura, R, Iyo, M, Matsuda, K, Akiyama, M, Ashikawa, K, Kashiwase, K, Tokunaga, K, Kondo, K, Saito, T, Shimasaki, A, Kawase, K, Kitajima, T, Matsuo, K, Itokawa, M, Someya, T, Inada, T, Hashimoto, R, Inoue, T, Akiyama, K, Tanii, H, Arai, H, Kanba, S, Ozaki, N, Kusumi, I, Yoshikawa, T, Kubo, M, Iwata, N

Text Extract:

When we set control samples excluding dyslipidemia/T2D subjects, rs174576 still reached genome-wide significance (P=4.9 109; OR=1.12, 95% confidence interval: 1.081.16), indicating that any possible bias derived from samples with dyslipidemia/T2D did not influence the significance

PMCID: PMCID5822448
Read on PMC
Legend:
Increased probability
Decreased probability
No known effect

Genotype AA

Effect Likelihood Level of evidenceResearch
Borderline personality disorder
1.20x
Replicated associations of FADS1, MAD1L1, and a rare variant at 10q26.13 with bipolar disorder in Chinese population (2018)

Zhao, Lijuan, Chang, Hong, Zhou, Dong-Sheng, Cai, Jun, Fan, Weixing, Tang, Wei, Tang, Wenxin, Li, Xingxing, Liu, Weiqing, Liu, Fang, He, Yuanfang, Bai, Yan, Sun, Yan, Dai, Jiapei, Li, Lingyi, Xiao, Xiao, Zhang, Chen, Li, Ming

Text Extract:

When our Han Chinese samples were combined with data from previous GWAS samples of Japanese17 (2964 cases and 61,887 controls) and Europeans22 (20,129 cases and 21,524 controls) for further meta-analysis, a stronger genome-wide association between rs174576 and BPD was seen under fixed effect model (two-tailed p=9.33E13, OR=1.098, Table 2)

PMCID: PMCID6286364
Read on PMC
Dyslipidemia/type 2 diabetes
1.24x
A genome-wide association study identifies two novel susceptibility loci and trans population polygenicity associated with bipolar disorder

Ikeda, M, Takahashi, A, Kamatani, Y, Okahisa, Y, Kunugi, H, Mori, N, Sasaki, T, Ohmori, T, Okamoto, Y, Kawasaki, H, Shimodera, S, Kato, T, Yoneda, H, Yoshimura, R, Iyo, M, Matsuda, K, Akiyama, M, Ashikawa, K, Kashiwase, K, Tokunaga, K, Kondo, K, Saito, T, Shimasaki, A, Kawase, K, Kitajima, T, Matsuo, K, Itokawa, M, Someya, T, Inada, T, Hashimoto, R, Inoue, T, Akiyama, K, Tanii, H, Arai, H, Kanba, S, Ozaki, N, Kusumi, I, Yoshikawa, T, Kubo, M, Iwata, N

Text Extract:

When we set control samples excluding dyslipidemia/T2D subjects, rs174576 still reached genome-wide significance (P=4.9 109; OR=1.12, 95% confidence interval: 1.081.16), indicating that any possible bias derived from samples with dyslipidemia/T2D did not influence the significance

PMCID: PMCID5822448
Read on PMC
Legend:
Increased probability
Decreased probability
No known effect

Distribution

Knowing your genome can actually tell you a lot about your ancestors.

The prevalence of the different genotypes is based on the native inhabitants of a region. In the map below you see how common each genotype is in the native inhabitants of those regions. Since genetic material is passed down form generation to generation, your DNA shows traces of the geographical origins of your ancestors.

This data is based on “The 1000 Genomes Project” which established one of the most detailed overviews of human genetic variations across the globe. The regions are broadly categorized into five continental groups: Africa, America, Europe, South Asia and East Asia. All continental groups together display the global prevalence. Click through the regions, to learn more about the local prevalence of the possible genotypes.

At present, there is no distribution data available for SNP rs174576.

Studies and sources

All of the resources below examine SNP rs174576

Genotype AG

Replicated associations of FADS1, MAD1L1, and a rare variant at 10q26.13 with bipolar disorder in Chinese population (2018)

Zhao, Lijuan, Chang, Hong, Zhou, Dong-Sheng, Cai, Jun, Fan, Weixing, Tang, Wei, Tang, Wenxin, Li, Xingxing, Liu, Weiqing, Liu, Fang, He, Yuanfang, Bai, Yan, Sun, Yan, Dai, Jiapei, Li, Lingyi, Xiao, Xiao, Zhang, Chen, Li, Ming

PMCID: PMCID6286364
A genome-wide association study identifies two novel susceptibility loci and trans population polygenicity associated with bipolar disorder

Ikeda, M, Takahashi, A, Kamatani, Y, Okahisa, Y, Kunugi, H, Mori, N, Sasaki, T, Ohmori, T, Okamoto, Y, Kawasaki, H, Shimodera, S, Kato, T, Yoneda, H, Yoshimura, R, Iyo, M, Matsuda, K, Akiyama, M, Ashikawa, K, Kashiwase, K, Tokunaga, K, Kondo, K, Saito, T, Shimasaki, A, Kawase, K, Kitajima, T, Matsuo, K, Itokawa, M, Someya, T, Inada, T, Hashimoto, R, Inoue, T, Akiyama, K, Tanii, H, Arai, H, Kanba, S, Ozaki, N, Kusumi, I, Yoshikawa, T, Kubo, M, Iwata, N

PMCID: PMCID5822448

Genotype GG

Replicated associations of FADS1, MAD1L1, and a rare variant at 10q26.13 with bipolar disorder in Chinese population (2018)

Zhao, Lijuan, Chang, Hong, Zhou, Dong-Sheng, Cai, Jun, Fan, Weixing, Tang, Wei, Tang, Wenxin, Li, Xingxing, Liu, Weiqing, Liu, Fang, He, Yuanfang, Bai, Yan, Sun, Yan, Dai, Jiapei, Li, Lingyi, Xiao, Xiao, Zhang, Chen, Li, Ming

PMCID: PMCID6286364
A genome-wide association study identifies two novel susceptibility loci and trans population polygenicity associated with bipolar disorder

Ikeda, M, Takahashi, A, Kamatani, Y, Okahisa, Y, Kunugi, H, Mori, N, Sasaki, T, Ohmori, T, Okamoto, Y, Kawasaki, H, Shimodera, S, Kato, T, Yoneda, H, Yoshimura, R, Iyo, M, Matsuda, K, Akiyama, M, Ashikawa, K, Kashiwase, K, Tokunaga, K, Kondo, K, Saito, T, Shimasaki, A, Kawase, K, Kitajima, T, Matsuo, K, Itokawa, M, Someya, T, Inada, T, Hashimoto, R, Inoue, T, Akiyama, K, Tanii, H, Arai, H, Kanba, S, Ozaki, N, Kusumi, I, Yoshikawa, T, Kubo, M, Iwata, N

PMCID: PMCID5822448

Genotype AA

Replicated associations of FADS1, MAD1L1, and a rare variant at 10q26.13 with bipolar disorder in Chinese population (2018)

Zhao, Lijuan, Chang, Hong, Zhou, Dong-Sheng, Cai, Jun, Fan, Weixing, Tang, Wei, Tang, Wenxin, Li, Xingxing, Liu, Weiqing, Liu, Fang, He, Yuanfang, Bai, Yan, Sun, Yan, Dai, Jiapei, Li, Lingyi, Xiao, Xiao, Zhang, Chen, Li, Ming

PMCID: PMCID6286364
A genome-wide association study identifies two novel susceptibility loci and trans population polygenicity associated with bipolar disorder

Ikeda, M, Takahashi, A, Kamatani, Y, Okahisa, Y, Kunugi, H, Mori, N, Sasaki, T, Ohmori, T, Okamoto, Y, Kawasaki, H, Shimodera, S, Kato, T, Yoneda, H, Yoshimura, R, Iyo, M, Matsuda, K, Akiyama, M, Ashikawa, K, Kashiwase, K, Tokunaga, K, Kondo, K, Saito, T, Shimasaki, A, Kawase, K, Kitajima, T, Matsuo, K, Itokawa, M, Someya, T, Inada, T, Hashimoto, R, Inoue, T, Akiyama, K, Tanii, H, Arai, H, Kanba, S, Ozaki, N, Kusumi, I, Yoshikawa, T, Kubo, M, Iwata, N

PMCID: PMCID5822448